You might want to check that your saddle is set properly; that the bottom of the adjustment screws are fully on the surface of the bridge plate. You could try applying some pressure on the part where the string goes over the saddle, or stretching the string near the saddle. If the string is new, it might take some time to settle too.
Other than that, as long as the offending metallic squeal isn't reflected on your amp, just accept it as part of your instrument's characteristics & just play as per normal.
Hope this helps.
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Yoko Kanno Fanboy.
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